Selected Case Center for Proteomics and Center for Synchrotron Biosciences Publications

 

2007

Murkin, A., Birck, M., Rinaldo-Matthis, A., Shi, W., Taylor, E., Almo, S., Schramm, V. Neighboring Group Participation in the Transition State of Human Purine Nucleoside Phosphorylase, Biochemistry 46: 5038-5049, 2007

 

Amisha Kamal, J.K., Benchaar, S., Takamoto, K., Reisler, E., Chance, M.R. "Three-dimensional structure of cofilin bound to monomeric actin derived by structural mass spectrometry data. Proc. Nat. Acad. Sci., 104(19): 7910-7915, 2007.

 

Davies, K.P., Stanevsky, Y., Moses, T., Chang, J.S., Chance, M.R., Melman, A. Ageing causes cytoplasmic retention of MaxiK channels in rat corporal smooth muscle celles. Int. J. Impotence Res. 19(4): 371-7, 2007.

 

Bharti, A., Ma, P.C., Salgia, R. Biomarker Discovery in Lung Cancer - Promises and CHallenges of Clinical Proteomics. Mass Spec. Rev.00: 1-15, 2007.

 

Takamoto, K., Amisha Kamal, J.K., Chance, M.R. "Biological and Chemical Implications of a Three Dimensional Model of Monomeric Actin Bound to Magnesium Chelated ATP" Structure 15(1): 39-51, 2007.

 

Chang, J., Cornell, J.E., Van Remmen, H., Hakala, K., Ward, W.F., Richardson, A. "Effect of aging and caloric restriction on mitochondrial proteome,"" J. Gerontol. A. Biol. Sci. Med. Sci., 62: 223-34, 2007.

 

Wang, B., Sun, G., Anderson, D.R., Jia, M., Previs, S., Anderson, V.E. "Isotopologue distributions of peptide product ions by tandem mass speectrometry: Quantitation of low levels of deuterium incorporation," Anal. Biochem., 367(1): 40-48, 2007.

 

Cassano, A.G., Wang, B., Anderson, D.R., Previs, S., Harris, M.E., Anderson, V.E. "Inaccuracies in selected ion monitoring determination of isotope ratios obviated by profile acquisition: nucleotide (18)O/(16)O measurements," Anal. Biochem., 367(1): 28-39, 2007.

 

Miyagi, M. and Rao, K.C.S. "Proteolytic 18O Labeling Strategy for Quantitative Proteomics," Mass Spect. Rev., 26: 121-136, 2007.

 

Kiselar, J., Mahaffy, R., Pollard, T.D., Almo, S.C., Chance, M.R. "Arp2/3 activation mediated by binding of nucleotides and WASp: Structural mass spectrometry approaches to large macromolecular complexes" Proc. Nat. Acad. Sci., 104(5): 1552-7, 2007.

 

Gupta, S., Sullivan, M., Toomey, J., Kiselar, J., Chance, M.R. "The Beamline X28C of the Center for Synchrotron Biosciences: a National Resource for Biomolecular Structure and Dynamics Experiments Using Synchrotron Footprinting," J. Synchrotron Rad., 14(Pt 3): 233-43, 2007.

 

Ilchenko, S.A., Cotter, R.J. "Collision Energetics in a Tandem Time-or-Flight (TOF/TOF) Mass Spectrometer with a Curved-Field Reflectron," Int. J. Mass Spectrometry, Printed online June, 6, 2007.

 

Garai, J., Haggerty, S., Rekhi, S., Chance, M.R. "Infared Absorption Spectroscopy Investigations Confirm the Extraterrestrial Origin of Coronado-Diamonds." Astrophysical J. 653, L153, 2007.

 

Shi, W., Chance, M.R. Structural Genomics-High Throughput Structure Determination of Protein Domains in Comprehensive Medicinal Chemistry II, Volume 3: Drug Discovery Technologies, J.B. Taylor and D.J. Triggle, Eds., Elsevier, 2007.

 

Manjasetty, B.A., Shi, W., Zhan C., Fiser, A., Chance, M./R. "A High-Throughput Approach to Protein Structure Analysis," Genetic Engineering, Vol. 28: 105-128, 2007.

 

Anni, H., Yohannes, E., Niculescu, R., Gonye, G.E., Chance, M.R. and Rubin, E. "Expression proteomics of alcoholism in rat sera," Alcohol. Clin. Exp. Rex. 31 (S2) 338, 2007.

 

Xu, G., Chance, M.R. "Hydroxyl Radical-Mediated Modification of Amino Acid Side Chains as Probes for Scructural Proteomics" Chemical Reviews, 107(8): 3514-43, 2007.

 

Zhu, W. "Crystal Structure of Mn2+ bound Escherichia coli L-arabinose Isomerase (ECAI): Its implications in Protein Catalytic Mechanism and Thermo-Stability", J. of Young Investigators, 17(3): 2007.

 

Johnson, E., Lyndaker, A., Deyhim, A., Sullivan, M., Chance, M.R., Abel, D., Toomey, J., Hulbert, S. White Light Focusing Mirror. A/P Conference Proceeedings, 879:675-678, 2007

 

Gupta, S., Cheng, H., Mollah, A.K.M.M., Jamison, E., Morris, S., Chance, M.R., Khrapunov, S., Brenowitz, M. "DNA and protein footprinting analysis of the modulation of DNA binding by the N-terminal domain of the Saccharomyces cerevisitae TATA Binding Protein", Biochemistry, Epub ahead of print, 2007, Aug. 7

 

Yoo, B., Raam, M., Rosenblum, R., Pagel, M.D. "Enzyme-responsive PARACEST MRI contrast agents: A new biomedical imaging approach for studies of the proteasome", Contrast Media and Molecular Imaging 2007, 2:189-198.

 

Yoo, B., Pagel, M.D. "Peptidyl Molecular Imaging Contrast Agents Using a New Solid Phase Peptide Sythesis Approach," Bioconj. Chem., 2007 18:903-11