Selected Core and Collaborative Publications

 

2001

 

Bonanno, J.B., Edo, C., Eswar, N., Pieper, U., Romanowski, M.J., Ilyin, V., Gerchman, S.E., Kycia, H., Studier, W., Sali, A., Burley, S.K. Structural Genomics of Enzymes Involved in Sterol/Isoprenoid Biosynthesis.  Proc. Natl. Acad. Sci. USA  98: 12896-12901 (2001).

 

Chance, M.R. nfolding of Apomyoglobin Examined by Synchrotron Footprinting. Biochem. Biophys. Res. Comm. 287: 614-621 (2001).

 

Chen, X., Shao, Z., Marinkovic, N. S., Miller, L.M., Zhou, P., Chance, M.R. Conformation Transition Kinetics of Regenerated Bombyx mori Silk Fibroin Membrane Monitored by Time-Resolved FTIR Spectroscopy.  Biophys. Chem. 89: 25-34 (2001).

 

Cloutier, T.E., Librizzi, M.D., Mollah, A.K., Brenowitz, M., Willis, I.M. Kinetic Trapping of DNA by Transcription Factor IIIB.  Proc. Natl. Acad. Sci. USA 17: 9581-9586 (2001).

 

Deo, R.C., Sonenberg, N., Burley, S.K. X-Ray Structure of the Human Hyperplastic Discs Protein: An Ortholog of the C-Terminal Domain of Poly(A) Binding Protein.  Proc. Natl. Acad. Sci. USA 98: 4414-4419 (2001).

 

Fedorov, A., Shi, W., Kicska, G., Fedorov, E., Tyler, P.C., Furneaux, R.H., Hanson, Schramm, V.L., Almo, S.C.  Transition State Structure of Purine Nuceloside Phosphorylase and Principles of Atomic Motion in Enzymatic Catalysis. Biochemistry 40: 853-860 (2001).

 

Goldsmith, S.C., Guan, J-Q., Almo, S.C., Chance, M.R. Synchrotron Protein Footprinting: A Technique to Investigate Protein-Protein Interactions.  J. Biomol. Struct. Dynam. 19: 405-419 (2001).

 

Kleifeld, O., Frenkel, A., Sagi, I.  Time Dependent XAS Studies of Trapped Enzyme-Substrate Complexes of Alcohol Dehydrogenase from Thermoanaerobacter brokii. J. Synchr. Rad. 8: 978-980 (2001).

 

Maleknia, S.D., Ralston, C.Y., Brenowitz, M., Downard, K.M., Chance, M.R.  Determination of Macromolecular Folding and Structure by Synchrotron X-Ray Radiolysis Techniques.  Anal. Bioch. 289: 103-115 (2001).

 

Miller, L.M., Vairavamurthy, V., Chance, M.R., Mendelsohn, R., Paschalis, E.P., Betts, F., Boskey, A.L.  In Situ Analysis of Mineral Content and Crystallinity in Bone Using Infrared Micro-Spectroscopy of the v4 PO43- Vibration.  Biochem. Biophys. Acta 1527: 11-19 (2001).

 

Powell, R.M., Parkhurst, K.M., Brenowitz, M., Parkhurst, L.J.  Marked Stepwise Differences within a Common Kinetic Mechanism Characterize TATA-Binding Protein Interactions with two Consensus Promoters.  J. Biol. Chem. 32: 29782-29791 (2001).

 

Rustandi, R., Vallely, K.M., Varlamova, O., Klein, M.G., Almo, S.C., Bresnick, A.R and, Weber, D.J. 1H, 13C, 15N NMR sequence-specific resonance assignments for human apo-Mts1 (S100A4). J. Biomol. NMR 19: 381-382 (2001).

 

Schwartz, J.-C., Zhang, X., Fedorov, A.A.,  Nathenson, S.G., Almo, S.C.  Structural Basis for Costimulation by the Human CTLA-4/B7-2 Complex.  Nature 410: 604-608 (2001).

 

Song, Z., Chouparova, E., Jones, K.W., Feng, H., Marinkovic, N.S.  FTIR Investigation of Sediments from NY/NJ Harbor, San Diego Bay and the Venetian Lagoon.  NSLS Activity Report 2-112-2-116 (2001).

 

Woodson, S.A., Deras, M.L., Brenowitz, M. Time-Resolved Hydroxyl Radical Footprinting of RNA with X-Rays. Current Protocols in Nucleic Acid Chemistry Unit 11.6: 11.6.1-11.6.23 (2001). 

 

Wu, J., Parkhurst, K.M., Powell, R.M., Brenowitz, M., Parkhurst, L.J.  DNA Bends in TATA-Binding Protein-TATA Complexes in Solution are DNA Sequence-Dependent. J. Biol. Chem. 18: 14614-14622 (2001).